Enter a query for model, reaction, metabolite, or gene using BiGG IDs or names. Optionally filter by a specific model.

Results are grouped into four sections:

• Models — reaction quality classes, ΔG distribution, compartment conditions
• Reactions — Δ_rG° values, equations, SD across models
• Metabolites — ID, names, formula, structure, related reactions
• Genes — associated models and reactions with GPR mapping

Click “Reaction Gibbs Energy” to expand detailed ΔG data.

• Reaction Classification Chart — shows four reaction classes: boundary, unstructured, unbalanced, and covered (covered split into reversible/irreversible).
• Reaction Class Definitions — explains each category of reactions.
• ΔG° Distribution Chart — histogram with ΔG = 0 reference line
• Compartment Conditions — pH, T, I, pMg, E used for ΔG prediction
• Download button for model-level results

Includes BiGG ID, name, Δ_rG° values, SD and reaction equations across different models.

Shows metabolite identifiers, chemical formula, structure (if available), and related reactions.

Provides gene ID, models containing the gene, linked reactions and GPR information.

Supported: SMILES, InChI, InChI_Key, KEGG, MetaNetX, HMDB, Name, BiGG (universal), ChEBI, PubChem, Mixed.

✔ Recommended for accuracy: SMILES or InChI

BiGG ID users: remove compartment suffix (e.g., succ_c → succ)

• Use spaces around “+” and “=” → A + B = C
• Place a space between coefficient and compound → 2 H2O
• Mixed identifiers: TYPE:ID

Sample equations available via auto-fill examples.

The results show:

• Predicted Δ_rG° (kJ/mol)
• Standard deviation (SD)
• Submitted reaction equation
• Applied reaction conditions (pH, I, pMg, E, T)

Enter multiple equations (one per line). All reactions share the same identifier type and global pH / I / pMg / E settings. Temperature is fixed at 298.15 K.

Batch Output

• Table layout with ΔG and SD per reaction
• Failures show error messages
• CSV download available